Job Description P40996 Confidence 99.03% Date Sun Jul 8 11:55:18 BST 2012 Rank 228 Aligned Residues 115 % Identity 13% Template c1ocuA_ PDB info PDB header:sorting protein Chain: A: PDB Molecule:sorting nexin; PDBTitle: crystal structure of the yeast px-domain protein grd19p2 (sorting nexin 3) complexed to3 phosphatidylinosytol-3-phospahte. Resolution 2.3 Å

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		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																		.	.	.	.	.								.										.	.	.	.
Query SS confidence																		.	.	.	.	.								.										.	.	.	.
Query Sequence		M	S	S	E	P	T	V	V	A	A	M	V	E	N	Y	M	.	.	.	.	.	I	R	D	D	Q	Y	W	.	Y	L	V	R	A	V	M	S	D	.	.	.	.	G	K	H	R	N	L	C	R	Y	Y	E	D	F	F	N	F	Q	T	K	F	L	E	L	F	P	N	E	A	G	R	G	D	E	R	R	V	I	P
Query Conservation																		.	.	.	.	.								.										.	.	.	.
Alig confidence																		.	.	.	.	.								.										.	.	.	.																									.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		E	P	E	N	F	L	E	I	E	V	H	N	P	K	T	H	I	P	N	G	M	D	S	K	G	M	F	T	D	Y	E	I	I	C	R	T	N	L	P	S	F	H	K	R	V	S	K	V	R	R	R	Y	S	D	F	E	F	F	R	K	L	I	K	E	I	S	.	.	.	.	M	L	N	H	P	K	V	M	V	P
Template Known Secondary structure			S	S															T	T	S	S	S	S	T	T														T	T		S	S	S																							.	.	.	.		T	T		T	T
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.
		362	.	.	.	.	.	.	.				370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		Y	M	P	G	P	V	D	D	.	.	.	V	N	E	L	I	S	S	Q	R	A	M	D	L	D	V	Y	L	K	E	M	C	R	L	P	A	R	L	L	E	N	E	L	V	K	L	F	F	L	P	L	D
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		H	L	P	G	K	I	L	L	S	N	R	F	S	N	E	V	I	E	E	R	R	Q	G	L	N	T	W	M	Q	S	V	A	G	H	P	L	L	Q	S	G	S	K	V	L	V	R	F	I	E	A	E	K
Template Known Secondary structure				S					T	T	G	G	G	S																				T																		S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions