Job Description P40996 Confidence 99.95% Date Sun Jul 8 11:55:18 BST 2012 Rank 5 Aligned Residues 162 % Identity 20% Template c1ng2A_ PDB info PDB header:oxidoreductase activator Chain: A: PDB Molecule:neutrophil cytosolic factor 1; PDBTitle: structure of autoinhibited p47phox Resolution 1.70 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	I	R	A	L	Y	D	Y	T	A	R	K	A	T	E	V	S	F	A	K	G	D	F	F	H	V	I	G	R	E	N	D	K	A	W	Y	E	V	C	N	P	A	A	G	T	R	G	F	V	P	V	S	H	F	E	E	I	G	K	T	V	K	S	E	R	D	S	D	G	S	G	Q	I	S	F	T	D	L	T
Query Conservation
Alig confidence																														.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	Y	R	A	I	A	D	Y	E	K	T	S	G	S	E	M	A	L	S	T	G	D	V	V	E	V	V	.	E	K	S	E	S	G	W	W	F	C	Q	.	.	M	K	A	K	R	G	W	I	P	A	S	F	L	E	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S		B			S	S	T	T				B		T	T							.				T	T	S						.	.										G	G	G				S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	S	S	T	T	R	S	S	I	S	E	L	H	S	G	S	Q	P	L	F	G	I	V	Q	F	D	F	A	A	E	R	P	D	E	L	E	A	K	A	G	E	A	I	I	I	I	A	R	S	N	H	E	W	L	V	A	K	P	I	G	R	L	G	G	P	G	L	I	P	L	S	F	I	Q	L	R	D	L	K
Query Conservation
Alig confidence		.	.	.	.																																																												.	.	.
Template Conservation		.	.	.	.																																																												.	.	.
Template Sequence		.	.	.	.	D	S	P	D	E	T	E	D	P	E	P	N	Y	A	G	E	P	Y	V	A	I	K	A	Y	T	A	V	E	G	D	E	V	S	L	L	E	G	E	A	V	E	V	I	H	K	L	L	D	G	W	W	V	I	R	K	D	D	V	T	.	.	.	G	Y	F	P	S	M	Y	L	Q	K	S	G	Q	D
Template Known Secondary structure		.	.	.	.	S		S	S		S							T	T							S	S		B				S	T	T	B			B		T	T										T	T	S							T	T			.	.	.					G	G	G				T	T	S
Template Predicted Secondary structure		.	.	.	.																																																												.	.	.
Template SS confidence
						214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	A	V	I	K	D	V	S	E	A	V	L	R	I	S	C	I	P	R	V	E	D	W	K	R	A	A	A	D	Y	K	K	S	S	I	P	L	G
Query Conservation
Alig confidence												.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		V	S	Q	A	Q	R	Q	I	K	R	.	.	.	.	.	G	A	P	P	R	R	S	S	I	R	N	A	H	S	I	H	Q	R	S	R	K	R	L	S
Template Known Secondary structure								T			S	.	.	.	.	.						G	G	G		S	S				S		S	S
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.						.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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