Job Description P40996 Confidence 62.55% Date Sun Jul 8 11:55:18 BST 2012 Rank 293 Aligned Residues 124 % Identity 13% Template c1m9sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains. Resolution 2.65 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																						.	.																		.
Query SS confidence																						.	.																		.
Query Sequence		A	R	K	A	T	E	V	S	F	A	K	G	D	F	F	H	V	I	G	R	.	.	E	N	D	K	A	W	Y	E	V	C	N	P	A	A	G	T	R	.	G	F	V	P	V	S	H	F	E	E	I	G	K	T	V	K	S	E	R	D	S	D	G	S	G	Q	I	S	F	T	D	L	T	T	N	S	S	T	T	R
Query Conservation																						.	.																		.
Alig confidence																						.	.											.	.						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	H	V	N	K	L	S	V	Y	Q	G	K	N	M	R	I	L	R	E	A	K	T	P	I	T	T	W	Y	Q	F	S	.	.	I	G	G	K	V	I	G	W	V	D	T	R	A	L	N	T	F	Y	K	Q	S	M	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	R
Template Known Secondary structure								G	G	G	G		S	S											S	S								.	.		T	T								T	T	T							G	G	G			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.			.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.																				.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		S	S	I	S	E	L	H	S	G	S	Q	P	L	F	G	I	V	Q	F	D	F	A	A	E	R	P	D	E	L	E	A	K	A	G	E	A	I	I	I	I	A	R	.	.	.	S	N	H	E	W	L	V	A	K	P	I	G	R	L	G	G	P	G	L	I	P	L	S	F	I	Q	L	R
Query Conservation																																												.	.	.
Alig confidence																																												.	.	.										.	.
Template Conservation																																																								.	.
Template Sequence		L	T	R	Y	V	S	A	N	K	A	G	E	S	Y	Y	K	V	P	V	A	D	N	P	V	K	R	G	T	L	A	K	Y	K	N	Q	K	L	I	V	D	C	Q	A	T	I	E	G	Q	L	W	Y	R	I	R	.	.	T	S	S	T	F	I	G	W	T	K	A	A	N	L	R	A	Q
Template Known Secondary structure								T	T	T	T	T	S				S	S	S	S			G	G	G					G	G	G	S	T	T												T	T								.	.		S	S	S							G	G	G
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.			.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions