Job Description P40996 Confidence 98.60% Date Sun Jul 8 11:55:18 BST 2012 Rank 240 Aligned Residues 52 % Identity 38% Template c1kjwA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:postsynaptic density protein 95; PDBTitle: sh3-guanylate kinase module from psd-95 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80
Predicted Secondary structure																.	.	.	.	.																																.	.	.	.
Query SS confidence																.	.	.	.	.																																.	.	.	.
Query Sequence		V	I	R	A	L	Y	D	Y	T	A	R	K	A	T	.	.	.	.	.	E	V	S	F	A	K	G	D	F	F	H	V	I	G	R	E	N	D	K	A	W	Y	E	V	C	N	P	A	A	G	T	.	.	.	.	R	G	F	V	P	V	S	H
Query Conservation																.	.	.	.	.																																.	.	.	.
Alig confidence																.	.	.	.	.														.																		.	.	.	.
Template Conservation																																		.
Template Sequence		Y	I	R	A	L	F	D	Y	D	K	T	K	D	C	G	F	L	S	Q	A	L	S	F	R	F	G	D	V	L	H	V	I	.	D	A	G	D	E	E	W	W	Q	A	R	R	V	H	S	D	S	E	T	D	D	I	G	F	I	P	S	K	R
Template Known Secondary structure						S	S		B										S	S	B			B		T	T							.				S	S	S									S	S				S
Template Predicted Secondary structure																																		.
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions