Email l.a.kelley@imperial.ac.uk Description C6Y4C0 Date Sun Jul 8 11:45:08 BST 2012 Unique Job ID 187c564f4c58c56f

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2f3jA_ 99.9 15 PDB header:transport protein Chain: A: PDB Molecule:rna and export factor binding protein 2; PDBTitle: the solution structure of the ref2-i mrna export factor2 (residues 1-155). 2 d1hl6a_ 99.9 20 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 3 c2i38A_ 99.8 22 PDB header:rna binding protein/chimera Chain: A: PDB Molecule:fusion protein consists of immunoglobin g- PDBTitle: solution structure of the rrm of srp20 4 c2ku7A_ 99.8 25 PDB header:transcription Chain: A: PDB Molecule:mll1 phd3-cyp33 rrm chimeric protein; PDBTitle: solution structure of mll1 phd3-cyp33 rrm chimeric protein 5 c2do0A_ 99.8 16 PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the rna binding domain of2 heterogeneous nuclear ribonucleoprotein m 6 c2kn4A_ 99.8 23 PDB header:rna binding protein Chain: A: PDB Molecule:immunoglobulin g-binding protein g, splicing factor; PDBTitle: the structure of the rrm domain of sc35 7 c3s8sA_ 99.8 13 PDB header:transcription Chain: A: PDB Molecule:histone-lysine n-methyltransferase setd1a; PDBTitle: crystal structure of the rrm domain of human setd1a 8 d1h2tz_ 99.8 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 9 d1n54b_ 99.8 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 10 c2e5jA_ 99.8 22 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:methenyltetrahydrofolate synthetase domain PDBTitle: solution structure of rna binding domain in2 methenyltetrahydrofolate synthetase domain containing 11 c3egnA_ 99.8 17 PDB header:splicing Chain: A: PDB Molecule:rna-binding protein 40; PDBTitle: c-terminal rna recognition motif of the u11/u12 65k protein 12 d1u6fa1 99.8 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 13 c2rneA_ 99.8 16 PDB header:rna binding protein Chain: A: PDB Molecule:tia1 protein; PDBTitle: solution structure of the second rna recognition motif2 (rrm) of tia-1 14 c3pgwS_ 99.8 22 PDB header:splicing/dna/rna Chain: S: PDB Molecule:u1-70k; PDBTitle: crystal structure of human u1 snrnp 15 d2cpxa1 99.8 18 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 16 c2do4A_ 99.8 21 PDB header:immune system Chain: A: PDB Molecule:squamous cell carcinoma antigen recognized by t- PDBTitle: solution structure of the rna binding domain of squamous2 cell carcinoma antigen recognized by t cells 3 17 d1fjeb1 99.8 21 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 18 d2cpza1 99.8 18 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 19 d1fj7a_ 99.8 19 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 20 d1wi8a_ 99.8 15 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 21 d1whwa_ not modelled 99.8 18 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 22 d1whxa_ not modelled 99.8 22 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 23 d1h2vz_ not modelled 99.8 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 24 d1fjca_ not modelled 99.8 19 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 25 d1b7fa1 not modelled 99.8 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 26 c2lcwA_ not modelled 99.8 16 PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein fus; PDBTitle: solution structure of fus/tls rrm domain 27 c2dnoA_ not modelled 99.8 15 PDB header:rna binding protein Chain: A: PDB Molecule:trinucleotide repeat containing 4 variant; PDBTitle: solution structure of rna binding domain in trinucleotide2 repeat containing 4 variant 28 c2fy1A_ not modelled 99.8 21 PDB header:structural protein/rna Chain: A: PDB Molecule:rna-binding motif protein, y chromosome, family PDBTitle: a dual mode of rna recognition by the rbmy protein 29 c2x1aA_ not modelled 99.8 14 PDB header:transcription/rna Chain: A: PDB Molecule:mrna 3'-end-processing protein rna15; PDBTitle: structure of rna15 rrm with rna bound (g) 30 c3ex7B_ not modelled 99.8 19 PDB header:hydrolase/rna binding protein/rna Chain: B: PDB Molecule:rna-binding protein 8a; PDBTitle: the crystal structure of ejc in its transition state 31 d1fxla1 not modelled 99.8 20 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 32 c3sdeB_ not modelled 99.8 23 PDB header:rna binding protein Chain: B: PDB Molecule:non-pou domain-containing octamer-binding protein; PDBTitle: crystal structure of a paraspeckle-protein heterodimer, pspc1/nono 33 d2cqba1 not modelled 99.8 26 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 34 d2cqia1 not modelled 99.8 26 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 35 d2cpea1 not modelled 99.8 13 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 36 d2cq0a1 not modelled 99.8 27 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 37 d1x5ua1 not modelled 99.8 24 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 38 d2j0sd1 not modelled 99.8 18 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 39 d1rk8a_ not modelled 99.8 22 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 40 c2jwnB_ not modelled 99.8 23 PDB header:rna binding protein Chain: B: PDB Molecule:embryonic polyadenylate-binding protein 2-b; PDBTitle: solution nmr structure of the protease-resistent domain of2 xenopus laevis epabp2 41 c2ywkA_ not modelled 99.8 18 PDB header:rna binding protein Chain: A: PDB Molecule:putative rna-binding protein 11; PDBTitle: crystal structure of rrm-domain derived from human putative2 rna-binding protein 11 42 c2dngA_ not modelled 99.8 15 PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 4h; PDBTitle: solution structure of rna binding domain in eukaryotic2 translation initiation factor 4h 43 d2cqga1 not modelled 99.8 12 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 44 d1cvja1 not modelled 99.8 22 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 45 d2cq3a1 not modelled 99.8 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 46 c2e44A_ not modelled 99.8 14 PDB header:rna binding protein Chain: A: PDB Molecule:insulin-like growth factor 2 mrna binding PDBTitle: solution structure of rna binding domain in insulin-like2 growth factor 2 mrna binding protein 3 47 d1x4ha1 not modelled 99.8 20 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 48 c2dnmA_ not modelled 99.8 27 PDB header:rna binding protein Chain: A: PDB Molecule:srp46 splicing factor; PDBTitle: solution structure of rna binding domain in srp46 splicing2 factor 49 d2cqda1 not modelled 99.8 16 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 50 d2up1a2 not modelled 99.8 16 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 51 d1x5sa1 not modelled 99.8 21 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 52 d2cq4a1 not modelled 99.8 17 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 53 d1fnxh1 not modelled 99.8 20 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 54 d1nu4a_ not modelled 99.8 26 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 55 c2e5hA_ not modelled 99.8 20 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:zinc finger cchc-type and rna-binding motif- PDBTitle: solution structure of rna binding domain in zinc finger2 cchc-type and rna binding motif 1 56 d2cpha1 not modelled 99.8 17 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 57 c3bs9A_ not modelled 99.8 22 PDB header:rna binding protein Chain: A: PDB Molecule:nucleolysin tia-1 isoform p40; PDBTitle: x-ray structure of human tia-1 rrm2 58 c2dnzA_ not modelled 99.8 19 PDB header:rna binding protein Chain: A: PDB Molecule:probable rna-binding protein 23; PDBTitle: solution structure of the second rna binding domain of rna2 binding motif protein 23 59 d1fnxh2 not modelled 99.8 22 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 60 d2f9da1 not modelled 99.8 20 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 61 d1wf1a_ not modelled 99.8 17 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 62 c2kxnB_ not modelled 99.8 23 PDB header:rna binding protein/rna Chain: B: PDB Molecule:transformer-2 protein homolog beta; PDBTitle: nmr structure of human tra2beta1 rrm in complex with aagaac rna 63 c3md1B_ not modelled 99.8 18 PDB header:rna binding protein Chain: B: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: crystal structure of the second rrm domain of yeast poly(u)-binding2 protein (pub1) 64 d2u2fa_ not modelled 99.8 16 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 65 d2adca1 not modelled 99.8 17 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 66 d2erra1 not modelled 99.8 26 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 67 c2dgpA_ not modelled 99.8 25 PDB header:rna binding protein Chain: A: PDB Molecule:bruno-like 4, rna binding protein; PDBTitle: solution structure of the n-terminal rna binding domain in2 bruno-like 4 rna-binding protein 68 d2cpda1 not modelled 99.8 22 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 69 d1no8a_ not modelled 99.8 14 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 70 c1no8A_ not modelled 99.8 14 PDB header:rna binding protein Chain: A: PDB Molecule:aly; PDBTitle: solution structure of the nuclear factor aly rbd domain 71 c2dhgA_ not modelled 99.8 15 PDB header:rna binding protein Chain: A: PDB Molecule:trna selenocysteine associated protein (secp43); PDBTitle: solution structure of the c-terminal rna recognition motif2 in trna selenocysteine associated protein 72 c4a8xA_ not modelled 99.8 21 PDB header:transcription Chain: A: PDB Molecule:rna-binding protein with serine-rich domain 1; PDBTitle: structure of the core asap complex 73 c2la6A_ not modelled 99.8 15 PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein fus; PDBTitle: solution nmr structure of rrm domain of rna-binding protein fus from2 homo sapiens, northeast structural genomics consortium target hr6430a 74 c2fc9A_ not modelled 99.8 23 PDB header:rna binding protein Chain: A: PDB Molecule:ncl protein; PDBTitle: solution structure of the rrm_1 domain of ncl protein 75 d1wexa_ not modelled 99.8 17 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 76 c2dgsA_ not modelled 99.8 15 PDB header:rna binding protein Chain: A: PDB Molecule:daz-associated protein 1; PDBTitle: solution structure of the second rna binding domain in daz-2 associated protein 1 77 c2fc8A_ not modelled 99.8 21 PDB header:rna binding protein Chain: A: PDB Molecule:ncl protein; PDBTitle: solution structure of the rrm_1 domain of ncl protein 78 c2dguA_ not modelled 99.8 22 PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein q; PDBTitle: solution structure of the rna binding domain in2 heterogeneous nuclear ribonucleoprotein q 79 d1x4aa1 not modelled 99.8 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 80 d1fjeb2 not modelled 99.8 19 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 81 c2dgtA_ not modelled 99.8 27 PDB header:rna binding protein Chain: A: PDB Molecule:rna-binding protein 30; PDBTitle: solution structure of the second rna binding domain in rna-2 binding protein 30 82 c3pgwP_ not modelled 99.8 24 PDB header:splicing/dna/rna Chain: P: PDB Molecule:u1-a; PDBTitle: crystal structure of human u1 snrnp 83 c3cw18_ not modelled 99.8 24 PDB header:splicing Chain: 8: PDB Molecule:u1 small nuclear ribonucleoprotein 70 kda; PDB Fragment:nucleotides 57-82 absent, replaced with kissing loop; PDBTitle: crystal structure of human spliceosomal u1 snrnp 84 c2d9pA_ not modelled 99.8 18 PDB header:rna binding protein Chain: A: PDB Molecule:polyadenylate-binding protein 3; PDBTitle: solution structure of rna binding domain 4 in2 polyadenylation binding protein 3 85 d2ghpa3 not modelled 99.8 30 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 86 d1cvja2 not modelled 99.8 29 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 87 d1x4ga1 not modelled 99.8 19 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 88 d1x4ba1 not modelled 99.8 18 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 89 c2divA_ not modelled 99.8 16 PDB header:rna binding protein Chain: A: PDB Molecule:trna selenocysteine associated protein; PDBTitle: solution structure of the rrm domain of trna selenocysteine2 associated protein 90 c2rs2A_ not modelled 99.8 13 PDB header:rna binding protein/rna Chain: A: PDB Molecule:rna-binding protein musashi homolog 1; PDBTitle: 1h, 13c, and 15n chemical shift assignments for musashi1 rbd1:r(guagu)2 complex 91 d1sxla_ not modelled 99.8 24 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 92 d1x5oa1 not modelled 99.8 16 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 93 d2k3ka1 not modelled 99.8 22 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 94 c2dh9A_ not modelled 99.8 23 PDB header:rna binding protein Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein m; PDBTitle: solution structure of the c-terminal rna binding domain in2 heterogeneous nuclear ribonucleoprotein m 95 d1zh5a2 not modelled 99.8 18 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 96 c2la4A_ not modelled 99.8 19 PDB header:rna binding protein Chain: A: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: nmr structure of the c-terminal rrm domain of poly(u) binding 1 97 c2ytcA_ not modelled 99.8 25 PDB header:transcription Chain: A: PDB Molecule:pre-mrna-splicing factor rbm22; PDBTitle: solution structure of rna binding domain in pre-mrna-2 splicing factor rbm22 98 d2cqpa1 not modelled 99.8 14 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 99 c3q2tC_ not modelled 99.7 16 PDB header:rna binding protein/rna Chain: C: PDB Molecule:cleavage and polyadenylation specificity factor subunit 6; PDBTitle: crystal structure of cfim68 rrm/cfim25/rna complex 100 d2ghpa1 not modelled 99.7 18 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 101 d1l3ka1 not modelled 99.7 20 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 102 c2a3jA_ not modelled 99.7 16 PDB header:rna binding protein Chain: A: PDB Molecule:u1 small nuclear ribonucleoprotein a; PDBTitle: structure of urndesign, a complete computational redesign2 of human u1a protein 103 c2dgxA_ not modelled 99.7 22 PDB header:rna binding protein Chain: A: PDB Molecule:kiaa0430 protein; PDBTitle: solution structure of the rna recognition motif in kiaa04302 protein 104 d1fhta_ not modelled 99.7 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 105 d2adca2 not modelled 99.7 21 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 106 c2e5iA_ not modelled 99.7 21 PDB header:gene regulation Chain: A: PDB Molecule:heterogeneous nuclear ribonucleoprotein l-like; PDBTitle: solution structure of rna binding domain 2 in heterogeneous2 nuclear ribonucleoprotein l-like 107 d1fxla2 not modelled 99.7 26 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 108 d1oiaa_ not modelled 99.7 24 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 109 d1whya_ not modelled 99.7 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 110 d1a9nb_ not modelled 99.7 22 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 111 d1x5ta1 not modelled 99.7 22 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 112 d2b0ga1 not modelled 99.7 21 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 113 d1p1ta_ not modelled 99.7 15 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 114 d1wf2a_ not modelled 99.7 17 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 115 d1h6kx_ not modelled 99.7 23 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 116 d1auda_ not modelled 99.7 25 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 117 d1l3ka2 not modelled 99.7 17 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 118 d2msta_ not modelled 99.7 16 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 119 c2dgwA_ not modelled 99.7 20 PDB header:rna binding protein Chain: A: PDB Molecule:probable rna-binding protein 19; PDBTitle: solution structure of the second rna recognition motif in2 rna-binding protein 19 120 d2bz2a1 not modelled 99.7 26 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD