Job Description C6Y4C0 Confidence 99.67% Date Sun Jul 8 11:45:08 BST 2012 Rank 180 Aligned Residues 82 % Identity 15% Template d3begb1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.90

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K	S	R	E
Query Conservation
Alig confidence																																					.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.
Template Sequence		N	R	V	V	V	S	G	L	P	P	S	G	S	W	Q	D	L	K	D	H	M	R	E	A	G	D	V	C	Y	A	D	V	Y	R	D	.	.	.	.	.	.	G	T	G	V	V	E	F	V	R	K	E	D	M	T	Y	A	V	R	K	L	D	N	T	K	F	R	S	H	E	G	E	T	A	Y	I	R	V	K	V
Template Known Secondary structure											S	S			T	T							G	G	G	S									T	T	.	.	.	.	.	.	S							S	S												T	T		B				T	T	S				B
Template Predicted Secondary structure																																					.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		98	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	H	R	D	D	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	S	Y	G	R	S	R
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions