Job Description C6Y4C0 Confidence 99.78% Date Sun Jul 8 11:45:08 BST 2012 Rank 50 Aligned Residues 86 % Identity 16% Template d2up1a2 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.10

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K
Query Conservation																																								.
Alig confidence																																								.																								.
Template Conservation																																																																.
Template Sequence		T	V	K	K	I	F	V	G	G	I	K	E	D	T	E	E	H	H	L	R	D	Y	F	E	Q	Y	G	K	I	E	V	I	E	I	M	T	D	R	G	S	G	K	K	R	G	F	A	F	V	T	F	D	D	H	D	S	V	D	K	I	V	I	.	Q	K	Y	H	T	V	N	G	H	N	C	E	V	R	K	A	L
Template Known Secondary structure				S									T	T											G	G	G	S											T	T	T												S										T	.	S	S					T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		95	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	E	R	Y	H	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	Q	E	M	A	S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions