Job Description C6Y4C0 Confidence 99.73% Date Sun Jul 8 11:45:08 BST 2012 Rank 136 Aligned Residues 86 % Identity 22% Template d2u1aa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	.
Query Conservation																																																																																	.
Alig confidence																																																		.	.	.	.																												.
Template Conservation																																																		.	.	.	.
Template Sequence		A	P	A	Q	P	L	S	E	N	P	P	N	H	I	L	F	L	T	N	L	P	E	E	T	N	E	L	M	L	S	M	L	F	N	Q	F	P	G	F	K	E	V	R	L	V	P	G	R	.	.	.	.	H	D	I	A	F	V	E	F	D	N	E	V	Q	A	G	A	A	R	D	A	L	Q	G	F	K	I	T	Q
Template Known Secondary structure					S				S	S		S		S									S	S												T	S	T	T								S	S		.	.	.	.									S	S											T	T	T			G	G	G
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	I	I	F	V	E	W	A	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	A	M	K	I	S	F	A	K	K
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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