Job Description C6Y4C0 Confidence 99.79% Date Sun Jul 8 11:45:08 BST 2012 Rank 38 Aligned Residues 87 % Identity 18% Template d2j0sd1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.21

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		P	Q	R	S	V	E	G	W	I	L	F	V	T	G	V	H	E	E	A	T	E	E	D	I	H	D	K	F	A	E	Y	G	E	I	K	N	I	H	L	N	L	D	R	R	T	G	Y	L	K	G	Y	T	L	V	E	Y	E	T	Y	K	E	A	Q	A	A	M	E	G	L	N	G	Q	D	L	M	G	Q	P	I	S
Template Known Secondary structure					B	T	T	B										T	T												T	T	S											T	T	T	S	S										S	S												T	T		B	S	S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	W	A	K	S	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	W	C	F	V	R	G
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions