Job Description C6Y4C0 Confidence 99.75% Date Sun Jul 8 11:45:08 BST 2012 Rank 98 Aligned Residues 83 % Identity 14% Template d2cqpa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		S	S	G	K	P	G	P	T	I	I	K	V	Q	N	M	P	F	T	V	S	I	D	E	I	L	D	F	F	Y	G	Y	Q	V	I	P	G	S	V	C	L	K	Y	N	E	K	G	M	P	T	G	E	A	M	V	A	F	E	S	R	D	E	A	T	A	A	V	I	D	L	N	D	R	P	I	G	S	R	K	V	K
Template Known Secondary structure							S	S							S			T	T										T	T	T	S				T	T	T							S	S	S											S												T	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		919	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.
		90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	L	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		999	1000	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions