Job Description C6Y4C0 Confidence 99.74% Date Sun Jul 8 11:45:08 BST 2012 Rank 122 Aligned Residues 78 % Identity 23% Template d2cqha1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	.	A	K	I	G	N	D	I	I	F	V	E	W	A	K	S	R
Query Conservation																																																																	.
Alig confidence																																			.	.	.	.	.																										.
Template Conservation																																			.	.	.	.	.
Template Sequence		N	K	L	Y	I	G	N	L	S	P	A	V	T	A	D	D	L	R	Q	L	F	G	D	R	K	L	P	L	A	G	Q	V	L	.	.	.	.	.	L	K	S	G	Y	A	F	V	D	Y	P	D	Q	N	W	A	I	R	A	I	E	T	L	S	G	K	V	E	L	H	G	K	I	M	E	V	D	Y	S	V	S	K
Template Known Secondary structure											T	T													T	T				S	S				.	.	.	.	.			T	T							S													T	T	T				T	T
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		97	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	R	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions