Job Description C6Y4C0 Confidence 99.79% Date Sun Jul 8 11:45:08 BST 2012 Rank 43 Aligned Residues 89 % Identity 12% Template d2cqga1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I
Query Conservation																																														.
Alig confidence																																														.																								.	.
Template Conservation																																																																						.	.
Template Sequence		V	K	R	A	V	Q	K	T	S	D	L	I	V	L	G	L	P	W	K	T	T	E	Q	D	L	K	E	Y	F	S	T	F	G	E	V	L	M	V	Q	V	K	K	D	L	K	T	G	H	S	K	G	F	G	F	V	R	F	T	E	Y	E	T	Q	V	K	V	M	S	.	.	Q	R	H	M	I	D	G	R	W	C
Template Known Secondary structure																S			S	S											G	G	G	S											S	S	S		S										S	S										.	.	S					T	T
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	E	W	A	K	S	R	E	R	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	C	K	L	P	N	S	K	Q	S	Q	D
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions