Job Description C6Y4C0 Confidence 99.74% Date Sun Jul 8 11:45:08 BST 2012 Rank 123 Aligned Residues 82 % Identity 24% Template d2cqca1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		G	N	R	A	N	P	D	P	N	C	C	L	G	V	F	G	L	S	L	Y	T	T	E	R	D	L	R	E	V	F	S	K	Y	G	P	I	A	D	V	S	I	V	Y	D	Q	Q	S	R	R	S	R	G	F	A	F	V	Y	F	E	N	V	D	D	A	K	E	A	K	E	R	A	N	G	M	E	L	D	G	R	R
Template Known Secondary structure						S			G	G	G						S			S	S												T	T	S											S	S	S	S	S										S	S												T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		88	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	V
Template Known Secondary structure			B
Template Predicted Secondary structure
Template SS confidence
		189	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions