Job Description C6Y4C0 Confidence 99.72% Date Sun Jul 8 11:45:08 BST 2012 Rank 145 Aligned Residues 85 % Identity 15% Template d2cq1a1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	.	.	K	I	G	N	D	I	I
Query Conservation																																																																									.	.
Alig confidence																																										.	.	.	.	.																											.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		K	M	D	G	A	P	S	R	V	L	H	I	R	K	L	P	G	E	V	T	E	T	E	V	I	A	L	G	L	P	F	G	K	V	T	N	I	L	M	L	.	.	.	.	.	K	G	K	N	Q	A	F	L	E	L	A	T	E	E	A	A	I	T	M	V	N	Y	Y	S	A	V	T	P	H	L	R	N	Q	P	I
Template Known Secondary structure					S	S			S						S			T	T									T	T	T	T	T	S									.	.	.	.	.	T	T	T	T							S	S														S					T	T
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	E	W	A	K	S	R	E	R	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	Q	Y	S	N	H	K	E	L	K	T
Template Known Secondary structure							S		S	S
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions