Job Description C6Y4C0 Confidence 99.79% Date Sun Jul 8 11:45:08 BST 2012 Rank 36 Aligned Residues 85 % Identity 27% Template d2cq0a1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		R	A	D	D	N	A	T	I	R	V	T	N	L	S	E	D	T	R	E	T	D	L	Q	E	L	F	R	P	F	G	S	I	S	R	I	Y	L	A	K	D	K	T	T	G	Q	S	K	G	F	A	F	I	S	F	H	R	R	E	D	A	A	R	A	I	A	G	V	S	G	F	G	Y	D	H	L	I	L	N	V	E
Template Known Secondary structure				S	S	S							S			T	T								T	T	S	T	T	T												S	S	S		S										S	S											T	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		92	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	K	S	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	A	K	P	S	T
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions