Job Description C6Y4C0 Confidence 99.82% Date Sun Jul 8 11:45:08 BST 2012 Rank 15 Aligned Residues 98 % Identity 18% Template d2cpxa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		N	A	P	S	N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		R	K	I	P	M	F	S	S	Y	N	P	G	E	P	N	K	V	L	Y	L	K	N	L	S	P	R	V	T	E	R	D	L	V	S	L	F	A	R	F	Q	E	K	K	G	P	P	I	Q	F	R	M	M	T	G	R	M	R	G	Q	A	F	I	T	F	P	N	K	E	I	A	W	Q	A	L	H	L	V	N	G	Y
Template Known Secondary structure					S									S			S									T	T										T						S	S	S	S									S	S	S		S							S	S											S	T	T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	G	N	D	I	I	F	V	E	W	A	K	S	R	E	R	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	Y	G	K	I	L	V	I	E	F	G	K	N	K	K	Q	R	S
Template Known Secondary structure		B		S	S		B										S
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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