Job Description C6Y4C0 Confidence 99.74% Date Sun Jul 8 11:45:08 BST 2012 Rank 111 Aligned Residues 81 % Identity 22% Template d1x5ta1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																													.								.
Query SS confidence																													.								.
Query Sequence		L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	.	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K	S	R	E
Query Conservation																													.								.
Alig confidence																													.								.
Template Conservation
Template Sequence		I	F	I	G	N	L	D	P	E	I	D	E	K	L	L	Y	D	T	F	S	A	F	G	V	I	L	Q	T	P	K	I	M	R	D	P	D	T	G	N	S	K	G	Y	A	F	I	N	F	A	S	F	D	A	S	D	A	A	I	E	A	M	N	G	Q	Y	L	C	N	R	P	I	T	V	S	Y	A	F	K	K	D
Template Known Secondary structure									T	T												T	T	S		B	S	S								T	T	T		S			S						B	S	S										T	T	T	T				T	T								S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		98	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		88	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions