Job Description C6Y4C0 Confidence 99.78% Date Sun Jul 8 11:45:08 BST 2012 Rank 51 Aligned Residues 87 % Identity 21% Template d1x5sa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		A	S	D	E	G	K	L	F	V	G	G	L	S	F	D	T	N	E	Q	S	L	E	Q	V	F	S	K	Y	G	Q	I	S	E	V	V	V	V	K	D	R	E	T	Q	R	S	R	G	F	G	F	V	T	F	E	N	I	D	D	A	K	D	A	M	M	A	M	N	G	K	S	V	D	G	R	Q	I	R	V	D	Q
Template Known Secondary structure						S						S			T	T														S											S	S	S		S			S							S	S												T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	R	E	R	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	K	S	S	D	N	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions