Job Description C6Y4C0 Confidence 99.67% Date Sun Jul 8 11:45:08 BST 2012 Rank 184 Aligned Residues 92 % Identity 14% Template d1x4fa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.
Predicted Secondary structure																												.																																																		.	.
Query SS confidence																												.																																																		.	.
Query Sequence		S	N	A	P	S	N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	.	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	.	.	K	M
Query Conservation																												.																																																		.	.
Alig confidence																												.																								.	.	.	.	.																						.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		P	E	G	K	P	D	Q	K	F	D	Q	K	Q	E	L	G	R	V	I	H	L	S	N	L	P	H	S	G	Y	S	D	S	A	V	L	K	L	A	E	P	Y	G	K	I	K	N	Y	I	L	M	.	.	.	.	.	R	M	K	S	Q	A	F	I	E	M	E	T	R	E	D	A	M	A	M	V	D	H	C	L	K
Template Known Secondary structure		S											S	S										S				S	S			S					T	T	T	T	T	T	S			S						.	.	.	.	.	T	T	T	T							S	S
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K	S	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	L	W	F	Q	G	R	C	V	K	V	D	L	S	E	K	Y	K	K
Template Known Secondary structure		S				S	S	S	S									S		S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions