Job Description C6Y4C0 Confidence 99.73% Date Sun Jul 8 11:45:08 BST 2012 Rank 140 Aligned Residues 83 % Identity 20% Template d1x4da1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																				.																																																	.	.
Query SS confidence																				.																																																	.	.
Query Sequence		G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	.	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	.	.	K	M	R	N	A	K	I	G	N	D	I
Query Conservation																				.																																																	.	.
Alig confidence																				.																							.	.	.	.	.																						.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		K	G	R	V	E	T	R	R	V	V	H	I	M	D	F	Q	R	G	K	N	L	R	Y	Q	L	L	Q	L	V	E	P	F	G	V	I	S	N	H	L	I	L	.	.	.	.	.	N	K	I	N	E	A	F	I	E	M	A	T	T	E	D	A	Q	A	A	V	D	Y	Y	T	T	T	P	A	L	V	F	G	K	P
Template Known Secondary structure															S				S	S	S							T	T	T	G	G	G	S									.	.	.	.	.	S	S	S	S							S	S														S					T	T
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		88	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	V	E	W	A	K	S	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	V	H	L	S	Q	K	Y	K	R
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions