Job Description C6Y4C0 Confidence 99.81% Date Sun Jul 8 11:45:08 BST 2012 Rank 21 Aligned Residues 92 % Identity 18% Template d1whwa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		S	S	G	S	S	G	S	G	R	L	F	V	R	N	L	S	Y	T	S	S	E	E	D	L	E	K	L	F	S	A	Y	G	P	L	S	E	L	H	Y	P	I	D	S	L	T	K	K	P	K	G	F	A	F	V	T	F	M	F	P	E	H	A	V	K	A	Y	A	E	V	D	G	Q	V	F	Q	G	R	M	L	H
Template Known Secondary structure							S											T	T												T	T	S											T	T	T					S							S	S											T	T	T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	W	A	K	S	R	E	R	Y	H	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	P	S	T	I	K	K	E	A	S	Q	S
Template Known Secondary structure									S	T	T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions