Return to main results Retrieve Phyre Job Id

Job DescriptionC6Y4C0
Confidence95.24%DateSun Jul 8 11:45:08 BST 2012
Rank227Aligned Residues68
% Identity24%Templated1whva_
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10......... 20.........30.........40.........50.........60.........70........
Predicted Secondary structure 














.




























Query SS confidence 















.


























































Query Sequence  APSNTPTGFNYKPGHT. LYIRNFGTDMRARTLGQAFEKWGRIVRCDIPISSNPQAHRYAFVEFEEREKAELAHEKM
Query Conservation   
   
          .
 
 

        
   
   
 
    
           


 
     
  

   
Alig confidence 















.

































.......

















Template Conservation         
 
  
 




 



  

  

  





 
 







.......
 
 
   
 
  
  
 
Template Sequence  GSSGSSGGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS. . . . . . . AFVSLSQPEQVQIAVNTS
Template Known Secondary structure 


S



S






S

TT

TTT
S


TT.......
S
Template Predicted Secondary structure 





























.......

Template SS confidence 











































































   423......430.........440.........450.........460.........470... ......480.........490.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions