Job Description C6Y4C0 Confidence 99.68% Date Sun Jul 8 11:45:08 BST 2012 Rank 177 Aligned Residues 98 % Identity 16% Template d1wg5a_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		N	A	P	S	N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A
Query Conservation																																																					.
Alig confidence																																																					.																								.
Template Conservation																																																																													.
Template Sequence		G	S	S	G	S	S	G	N	S	P	D	T	A	N	D	G	F	V	R	L	R	G	L	P	F	G	C	S	K	E	E	I	V	Q	F	F	S	G	L	E	I	V	P	N	G	M	T	L	P	V	D	F	Q	G	R	S	T	G	E	A	F	V	Q	F	A	S	Q	E	I	A	E	K	A	L	K	.	K	H	K	E
Template Known Secondary structure											S	S		S									S			T	T										T	T	T												B		S	S	S		B		S							S	S									T	.	T	T	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	G	N	D	I	I	F	V	E	W	A	K	S	R	E	R	Y	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	G	H	R	Y	I	E	I	F	K	S	S	R	A	E	V	R	T	S
Template Known Secondary structure			S	S	S	S									T	T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions