Job Description C6Y4C0 Confidence 99.83% Date Sun Jul 8 11:45:08 BST 2012 Rank 12 Aligned Residues 95 % Identity 23% Template d1u6fa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		S	N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		P	P	T	Q	M	N	P	E	P	D	V	L	R	N	L	M	V	N	Y	I	P	T	T	V	D	E	V	Q	L	R	Q	L	F	E	R	Y	G	P	I	E	S	V	K	I	V	C	D	R	E	T	R	Q	S	R	G	Y	G	F	V	K	F	Q	S	G	S	S	A	Q	Q	A	I	A	G	L	N	G	F	N	I	L
Template Known Secondary structure			S	S		S	S			T	T	T	T	S						S		S	T	T														S											T	T	T	T											S	S											T	T	T				S
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	I	I	F	V	E	W	A	K	S	R	E	R	Y	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	R	L	K	V	A	L	A	A	S	G	H	Q	R	P
Template Known Secondary structure		S								S	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions