Job Description C6Y4C0 Confidence 99.73% Date Sun Jul 8 11:45:08 BST 2012 Rank 135 Aligned Residues 85 % Identity 14% Template d1sjqa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	.	.	K	M	R	N	A	K	I	G	N	D	I	I	F	V
Query Conservation																																																																		.	.
Alig confidence																																								.	.	.	.	.																						.	.
Template Conservation																																								.	.	.	.	.
Template Sequence		S	G	V	P	S	R	V	I	H	I	R	K	L	P	I	D	V	T	E	G	E	V	I	S	L	G	L	P	F	G	K	V	T	N	L	L	M	L	.	.	.	.	.	K	G	K	N	Q	A	F	I	E	M	N	T	E	E	A	A	N	T	M	V	N	Y	Y	T	S	V	T	P	V	L	R	G	Q	P	I	Y	I
Template Known Secondary structure													S			T	T	S																						.	.	.	.	.	T	T	T	T							S	S												T	T	S					T	T					B
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	A	K	S	R	E	R	Y	H	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	F	S	N	H	K	E	L	K	T	D	S
Template Known Secondary structure					S	S	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions