Job Description C6Y4C0 Confidence 99.74% Date Sun Jul 8 11:45:08 BST 2012 Rank 113 Aligned Residues 95 % Identity 15% Template d1p1ta_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		P	A	V	D	R	S	L	R	S	V	F	V	G	N	I	P	Y	E	A	T	E	E	Q	L	K	D	I	F	S	E	V	G	P	V	V	S	F	R	L	V	Y	D	R	E	T	G	K	P	K	G	Y	G	F	C	E	Y	Q	D	Q	E	T	A	L	S	A	M	R	N	L	N	G	R	E	F	S	G	R	A	L	R
Template Known Secondary structure				S					S						S			T	T	S											T	T	S			S								T	T	T	T											S												S	S	S	B	S		S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	W	A	K	S	R	E	R	Y	H	R	D	D	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	N	A	A	S	E	K	N	K	E	E	L	K	S	L
Template Known Secondary structure					T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions