Job Description C6Y4C0 Confidence 99.78% Date Sun Jul 8 11:45:08 BST 2012 Rank 54 Aligned Residues 82 % Identity 26% Template d1nu4a_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 1.80

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Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	.	.	.	.	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.															.	.
Template Conservation																																											.	.
Template Sequence		R	P	N	H	T	I	Y	I	N	N	L	N	E	K	I	K	K	D	E	L	K	K	S	L	H	A	I	F	S	R	F	G	Q	I	L	D	I	L	V	S	R	.	.	S	L	K	M	R	G	Q	A	F	V	I	F	K	E	V	S	S	A	T	N	A	L	R	S	M	Q	G	F	P	F	Y	D	K	P	M	R	I
Template Known Secondary structure					S						S			T	T	S														G	G	G	S										.	.					T	T							S	S												T	T				T	T
Template Predicted Secondary structure																																											.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		91	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	A	K	S	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	A	K	T	D	S	D
Template Known Secondary structure					S	S			T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions