Job Description C6Y4C0 Confidence 99.83% Date Sun Jul 8 11:45:08 BST 2012 Rank 9 Aligned Residues 88 % Identity 23% Template d1n54b_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.72

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		K	K	S	C	T	L	Y	V	G	N	L	S	F	Y	T	T	E	E	Q	I	Y	E	L	F	S	K	S	G	D	I	K	K	I	I	M	G	L	D	K	M	K	K	T	A	C	G	F	C	F	V	E	Y	Y	S	R	A	D	A	E	N	A	M	R	Y	I	N	G	T	R	L	D	D	R	I	I	R	T	D	W	D
Template Known Secondary structure		T	T											T	T											T	T	T	S											T	T	T		S										S	S											T	T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	R	E	R	Y	H	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	F	K	E	G	R	Q	Y
Template Known Secondary structure		S				T	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions