Job Description C6Y4C0 Confidence 99.52% Date Sun Jul 8 11:45:08 BST 2012 Rank 208 Aligned Residues 78 % Identity 18% Template d1jmta_ SCOP info Ferredoxin-like RNA-binding domain, RBD Splicing factor U2AF subunits Resolution 2.20

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Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.																					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	T	L	Y	I	R	N	F	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	T	I	A	L	L	N	I	Y	R	N	P	Q	D	G	L	R	S	A	V	S	D	V	E	M	Q	E	H	Y	D	E	F	F	E	E	V	F	T	E	M	E	E	K	Y	G	E	V	E	E	M	N	V	C	D	N	L	G	D	H	L	V	G	N	V	Y	V	K	F	R	R	E	E	D	A	E	K	A	V	I
Template Known Secondary structure																																														T											S	S	S	S	S	S									S
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	N	N	R	W	F	N	G	Q	P	I	H	A	E	L	S	P
Template Known Secondary structure				T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions