Job Description C6Y4C0 Confidence 99.77% Date Sun Jul 8 11:45:08 BST 2012 Rank 80 Aligned Residues 80 % Identity 19% Template d1fjeb2 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W
Query Conservation
Alig confidence																																							.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		K	V	R	A	A	R	T	L	L	A	K	N	L	S	F	N	I	T	E	D	E	L	K	E	V	F	E	D	A	L	E	I	R	L	V	S	Q	.	.	.	.	D	G	K	S	K	G	I	A	Y	I	E	F	K	S	E	A	D	A	E	K	N	L	E	E	K	Q	G	A	E	I	D	G	R	S	V	S	L	Y	Y
Template Known Secondary structure		T	T	G	G	G	G						S			S	S											T	T		S							S	.	.	.	.	S	S	S			S							S	S												T					T	T
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		93	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	E	K
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions