Job Description C6Y4C0 Confidence 99.76% Date Sun Jul 8 11:45:08 BST 2012 Rank 86 Aligned Residues 84 % Identity 29% Template d1cvja2 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.60

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Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		S	G	V	G	N	I	F	I	K	N	L	D	K	S	I	D	N	K	A	L	Y	D	T	F	S	A	F	G	N	I	L	S	C	K	V	V	C	D	E	.	N	G	S	K	G	Y	G	F	V	H	F	E	T	Q	E	A	A	E	R	A	I	E	K	M	N	G	M	L	L	N	D	R	K	V	F	V	G	R	F	K
Template Known Secondary structure		T	T	T	T						S			S	S												T	T	S										B	T	.	T	B			S							S									T	T	S	S	S					T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		95	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	E	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	K	E	R
Template Known Secondary structure			T	T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions