Job Description C6Y4C0 Confidence 99.73% Date Sun Jul 8 11:45:08 BST 2012 Rank 142 Aligned Residues 81 % Identity 25% Template d1b7fa2 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.60

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Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.
Predicted Secondary structure																																											.																																	.	.
Query SS confidence																																											.																																	.	.
Query Sequence		N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	.	.	D	I	I	F
Query Conservation																																											.																																	.	.
Alig confidence																																											.																																	.	.
Template Conservation
Template Sequence		E	S	I	K	D	T	N	L	Y	V	T	N	L	P	R	T	I	T	D	D	Q	L	D	T	I	F	G	K	Y	G	S	I	V	Q	K	N	I	L	R	D	K	L	T	G	R	P	R	G	V	A	F	V	R	Y	N	K	R	E	E	A	Q	E	A	I	S	A	L	N	N	V	I	P	E	G	G	S	Q	P	L	S
Template Known Secondary structure			T	T	T	T							S			T	T											T	S	S	S											T	T	T												S	S												T	T				T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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