Job Description C6Y4C0 Confidence 99.77% Date Sun Jul 8 11:45:08 BST 2012 Rank 72 Aligned Residues 84 % Identity 21% Template c4a8xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna-binding protein with serine-rich domain 1; PDBTitle: structure of the core asap complex Resolution 1.90 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	.	.	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A
Query Conservation																																							.	.
Alig confidence																																							.	.
Template Conservation
Template Sequence		K	P	T	K	V	H	I	G	R	L	T	R	N	V	T	K	D	H	I	M	E	I	F	S	T	Y	G	K	I	K	M	I	D	M	P	V	E	R	M	H	P	H	L	S	K	G	Y	A	Y	V	E	F	E	N	P	D	E	A	E	K	A	L	K	H	M	D	G	G	Q	I	D	G	Q	E	I	T	A	T	A	V
Template Known Secondary structure													T	T												T	T	S											T	T							S							S	S												T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		94	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	R	E	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	P	W	P	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions