Job Description C6Y4C0 Confidence 99.54% Date Sun Jul 8 11:45:08 BST 2012 Rank 206 Aligned Residues 94 % Identity 15% Template c3thtB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:alkylated dna repair protein alkb homolog 8; PDBTitle: crystal structure and rna binding properties of the rrm/alkb domains2 in human abh8, an enzyme catalyzing trna hypermodification, northeast3 structural genomics consortium target hr5601b Resolution 3.01 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																				.	.																																																												.
Query SS confidence																				.	.																																																												.
Query Sequence		N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	.	.	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	.
Query Conservation																				.	.																																																												.
Alig confidence																				.	.																											.	.	.	.	.																													.
Template Conservation																																																.	.	.	.	.
Template Sequence		H	E	G	I	E	T	V	S	Y	A	T	Q	S	L	V	V	A	N	G	G	L	G	N	G	V	S	R	N	Q	L	L	P	V	L	E	K	C	G	L	V	D	A	L	L	M	P	.	.	.	.	.	P	N	K	P	Y	S	F	A	R	Y	R	T	T	E	E	S	K	R	A	Y	V	T	L	N	G	K	E	V	V
Template Known Secondary structure		T	T	T					S	S			S						T		S	G	G	G	T												T	T	S									.	.	.	.	.	T	T		S							S	S											T	T	T
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
				84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	N	D	I	I	F	V	E	W	A	K	S	R	E	R	Y	H	R	D	D	K	R
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		D	D	L	G	Q	K	I	T	L	Y	L	N	F	V	E	K	V	Q	W	K	E	L	R	P
Template Known Secondary structure			T	T	S											S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions