Job Description C6Y4C0 Confidence 97.31% Date Sun Jul 8 11:45:08 BST 2012 Rank 223 Aligned Residues 71 % Identity 13% Template c3p3dA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:nucleoporin 53; PDBTitle: crystal structure of the nup53 rrm domain from pichia guilliermondii Resolution 2.35 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																									.	.	.	.
Query SS confidence																																									.	.	.	.
Query Sequence		L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	.	.	.	.	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W
Query Conservation																																									.	.	.	.
Alig confidence												.																													.	.	.	.																				.
Template Conservation												.																																																				.
Template Sequence		I	L	V	F	G	Y	P	E	T	M	.	A	N	Q	V	I	A	Y	F	Q	E	F	G	T	I	L	E	D	F	E	V	L	R	K	P	F	V	P	I	F	S	G	N	S	W	T	K	I	T	Y	D	N	P	A	S	A	V	D	A	L	L	E	.	N	G	A	V	F	N	G	V	L	L	G	V	I	P
Template Known Secondary structure									G	G	G	.									G	G	G	S		B		S			G	G	G											T	T						B	S	S									T	T	.	T	T				T	T
Template Predicted Secondary structure												.																																																				.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions