Job Description C6Y4C0 Confidence 99.60% Date Sun Jul 8 11:45:08 BST 2012 Rank 197 Aligned Residues 82 % Identity 18% Template c3n9uI_ PDB info PDB header:splicing Chain: I: PDB Molecule:cleavage and polyadenylation specificity factor subunit 7; PDBTitle: crystal structure of the complex between the 25 kda subunit and the 592 kda subunit (rrm domain) of human cleavage factor im Resolution 1.92 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																										.	.											.
Query SS confidence																										.	.											.
Query Sequence		L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	.	.	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K	S	R
Query Conservation																										.	.											.
Alig confidence																										.	.											.													.	.	.	.	.
Template Conservation																																																			.	.	.	.	.
Template Sequence		V	Y	V	G	S	F	S	W	W	T	T	D	Q	Q	L	I	Q	V	I	R	S	I	G	V	Y	D	V	V	E	L	K	F	A	E	N	R	A	N	G	Q	S	K	G	Y	A	E	V	V	V	.	.	.	.	.	V	H	K	L	L	E	L	L	P	G	K	V	L	N	G	E	K	V	D	V	R	P	A	T	R	Q
Template Known Secondary structure									T	T												T	T	T													T	T	T												.	.	.	.	.								S	T	T				T	T									S
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	Y	H	R	D	D	K	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	S	Q	F	E	A	Q	A	R
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions