Job Description C6Y4C0 Confidence 99.78% Date Sun Jul 8 11:45:08 BST 2012 Rank 63 Aligned Residues 77 % Identity 18% Template c3md1B_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: crystal structure of the second rrm domain of yeast poly(u)-binding2 protein (pub1) Resolution 1.60 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		T	F	N	L	F	V	G	D	L	N	V	N	V	D	D	E	T	L	R	N	A	F	K	D	F	P	S	Y	L	S	G	H	V	M	W	D	M	Q	T	G	S	S	R	G	Y	G	F	V	S	F	T	S	Q	D	D	A	Q	N	A	M	D	S	M	Q	G	Q	D	L	N	G	R	P	L	R	I	N	W	A
Template Known Secondary structure									S			T	T											T	T	S	T	T										T	T	T												S													T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions