Job Description C6Y4C0 Confidence 99.83% Date Sun Jul 8 11:45:08 BST 2012 Rank 11 Aligned Residues 83 % Identity 17% Template c3egnA_ PDB info PDB header:splicing Chain: A: PDB Molecule:rna-binding protein 40; PDBTitle: c-terminal rna recognition motif of the u11/u12 65k protein Resolution 2.50 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.
Query Sequence		K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	.	.	.	.	.	.	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I
Query Conservation																																				.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	N	C	R	I	Y	V	K	N	L	A	K	H	V	Q	E	K	D	L	K	Y	I	F	G	R	Y	V	D	F	S	S	E	T	Q	R	I	M	F	D	I	R	L	M	K	E	G	R	M	K	G	Q	A	F	I	G	L	P	N	E	K	A	A	A	K	A	L	K	E	A	N	G	Y	V	L	F	G	K	P	M
Template Known Secondary structure		S			S									T	T											G	G	G			T	T																T	T	T									S	S												T	T	B			T	T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	E	W	A	K	S	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	Q	F	A	R	S	A	R
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		497	.	.	500	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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