Job Description C6Y4C0 Confidence 99.73% Date Sun Jul 8 11:45:08 BST 2012 Rank 131 Aligned Residues 77 % Identity 18% Template c3b4mD_ PDB info PDB header:rna binding protein Chain: D: PDB Molecule:polyadenylate-binding protein 2; PDBTitle: crystal structure of human pabpn1 rrm Resolution 2.82 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W
Query Conservation																																									.
Alig confidence																																									.																								.
Template Conservation																																																																	.
Template Sequence		A	D	A	R	S	I	Y	V	G	N	V	D	Y	G	A	T	A	E	E	L	E	A	H	F	H	G	C	G	S	V	N	R	V	T	I	L	C	D	K	F	S	G	H	P	K	G	F	A	Y	I	E	F	S	D	K	E	S	V	R	T	S	L	A	.	L	D	E	S	L	F	R	G	R	Q	I	K	V	I	P
Template Known Secondary structure				S	S						S			T	T											G	G	G											S		S	S	S	S										S	S	S							G	G	.	G	T	T				T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions