Job Description C6Y4C0 Confidence 99.70% Date Sun Jul 8 11:45:08 BST 2012 Rank 169 Aligned Residues 75 % Identity 20% Template c2xnqA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:nuclear polyadenylated rna-binding protein 3; PDBTitle: structural insights into cis element recognition of non-2 polyadenylated rnas by the nab3-rrm Resolution 1.30 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	.	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W
Query Conservation																.
Alig confidence																.																							.	.	.	.	.	.	.																												.
Template Conservation																																							.	.	.	.	.	.	.																												.
Template Sequence		S	H	M	K	S	R	L	F	I	G	N	L	P	L	K	N	V	S	K	E	D	L	F	R	I	F	S	P	Y	G	H	I	M	Q	I	N	I	.	.	.	.	.	.	.	K	N	A	F	G	F	I	Q	F	D	N	P	Q	S	V	R	D	A	I	E	E	S	Q	E	M	N	F	.	G	K	K	L	I	L	E	V
Template Known Secondary structure				T	T							S			S	S												G	G	G	S								.	.	.	.	.	.	.		S	S							S	S											T	T	S			T	.	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.																												.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.								.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.
		93	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	S	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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