Job Description C6Y4C0 Confidence 99.56% Date Sun Jul 8 11:45:08 BST 2012 Rank 204 Aligned Residues 75 % Identity 19% Template c2vopA_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:lupus la protein; PDBTitle: crystal structure of n-terminal domains of human la protein2 complexed with rna oligomer auuuu Resolution 2.8 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W
Query Conservation
Alig confidence																																																														.
Template Conservation																																																														.
Template Sequence		N	R	S	V	Y	I	K	G	F	P	T	D	A	T	L	D	D	I	K	E	W	L	E	D	K	G	Q	V	L	N	I	Q	M	R	R	T	L	H	K	A	F	K	G	S	I	F	V	V	F	D	S	I	E	S	A	K	K	F	V	E	.	T	P	G	Q	K	Y	K	E	T	D	L	L	I	L	F
Template Known Secondary structure		T	T									T	T											T	T	S												S	S	S											S	S									T	.		S				S	T	T	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions