Job Description C6Y4C0 Confidence 99.83% Date Sun Jul 8 11:45:08 BST 2012 Rank 13 Aligned Residues 104 % Identity 16% Template c2rneA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:tia1 protein; PDBTitle: solution structure of the second rna recognition motif2 (rrm) of tia-1 Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		N	A	P	S	N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		G	S	S	G	S	S	G	Q	K	K	D	T	S	N	H	F	H	V	F	V	G	D	L	S	P	E	I	T	T	E	D	I	K	A	A	F	A	P	F	G	R	I	S	D	A	R	V	V	K	D	M	A	T	G	K	S	K	G	Y	G	F	V	S	F	F	N	K	W	D	A	E	N	A	I	Q	Q	M	G	G	Q
Template Known Secondary structure							S				S	S		S	S	S							S			T	T											G	G	G												T	T	T		S										S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	G	N	D	I	I	F	V	E	W	A	K	S	R	E	R	Y	H	R	D	D	K	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	G	G	R	Q	I	R	T	N	W	A	T	R	K	P	P	A	P	K	S	T	Y	E	S
Template Known Secondary structure				T	T								S							S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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