Job Description C6Y4C0 Confidence 99.75% Date Sun Jul 8 11:45:08 BST 2012 Rank 96 Aligned Residues 81 % Identity 19% Template c2la4A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:nuclear and cytoplasmic polyadenylated rna-binding protein PDBTitle: nmr structure of the c-terminal rrm domain of poly(u) binding 1 Resolution UNK

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V
Query Conservation
Alig confidence																																										.	.	.	.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		R	S	A	P	P	R	V	T	T	A	Y	I	G	N	I	P	H	F	A	T	E	A	D	L	I	P	L	F	Q	N	F	G	F	I	L	D	F	K	H	Y	.	.	.	.	.	P	E	K	G	C	C	F	I	K	Y	D	T	H	E	Q	A	A	V	C	I	V	A	L	A	N	F	P	F	Q	G	R	N	L	R	T
Template Known Secondary structure		T	T	S		S	S								S			T	T												T	T	S			S						.	.	.	.	.	T	T	T	T							S	S												T	T				T	T
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.						.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		91	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	A	K	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	W	G	K	E	R
Template Known Secondary structure			B
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions