Job Description C6Y4C0 Confidence 99.73% Date Sun Jul 8 11:45:08 BST 2012 Rank 130 Aligned Residues 84 % Identity 24% Template c2jx2A_ PDB info PDB header:transcription Chain: A: PDB Molecule:negative elongation factor e; PDBTitle: solution conformation of rna-bound nelf-e rrm Resolution UNK

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K
Query Conservation
Alig confidence													.	.																								.	.	.	.	.
Template Conservation													.	.																								.	.	.	.	.
Template Sequence		R	K	G	N	T	L	Y	V	Y	G	E	.	.	D	M	T	P	T	L	L	R	G	A	F	S	P	F	G	N	I	I	D	L	S	M	D	.	.	.	.	.	P	P	R	N	C	A	F	V	T	Y	E	K	M	E	S	A	D	Q	A	V	A	E	L	N	G	T	Q	V	E	S	V	Q	L	K	V	N	I	A	R
Template Known Secondary structure				B								S	.	.	S											T	T	T										.	.	.	.	.	T	T	T	T							S	S												T	T				S	S
Template Predicted Secondary structure													.	.																								.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	E	R	Y	H	R	D	D	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	P	M	L	D	A	A	T	G	K
Template Known Secondary structure				T	T	T	T	B			S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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