Job Description C6Y4C0 Confidence 99.79% Date Sun Jul 8 11:45:08 BST 2012 Rank 40 Aligned Residues 87 % Identity 23% Template c2jwnB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:embryonic polyadenylate-binding protein 2-b; PDBTitle: solution nmr structure of the protease-resistent domain of2 xenopus laevis epabp2 Resolution UNK

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	.	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I	F	V	E	W	A	K	S	R
Query Conservation																																						.
Alig confidence																																						.																								.
Template Conservation																																																														.
Template Sequence		R	S	V	Y	V	G	N	V	D	Y	G	S	T	A	Q	D	L	E	A	H	F	S	S	C	G	S	I	N	R	I	T	I	L	C	D	K	F	S	G	H	P	K	G	Y	A	Y	I	E	F	A	E	R	N	S	V	D	A	A	V	A	.	M	D	E	T	V	F	R	G	R	T	I	K	V	L	P	K	R	T	N
Template Known Secondary structure		T									T	T												T	T	S												T	T	S	S										S	S									T	.	T	S	S				T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		97	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	Y	H	R	D	D	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	G	I	S	S	T	D	R
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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