Return to main results Retrieve Phyre Job Id

Job DescriptionC6Y4C0
Confidence99.72%DateSun Jul 8 11:45:08 BST 2012
Rank148Aligned Residues91
% Identity13%Templatec2e5gA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:u6 snrna-specific terminal uridylyltransferase 1; PDBTitle: solution structure of rna binding domain in rna binding2 motif protein 21
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  GFNYKPGHTLYIRNFGTDMRARTLGQAFEKWGRIVRCDIPISSNPQAHRYAFVEFEEREKAELAHEKMRNAKIGNDIIFV
Query Conservation           
 
 

        
   
   
 
    
           


 
     
  

   

  
 
  
 
Alig confidence 












































....
















.












Template Conservation 
      







     
  
   
   
 
    
      .... 


 
     
  

 .     
 

 
 
Template Sequence  SSGSSGLRSVFVSGFPRGVDSAQLSEYFLAFGPVASVVMDKDKGV. . . . FAIVEMGDVGAREAVLS. QSQHSLGGHRLRV
Template Known Secondary structure 
S

TT




TT

GGGTS

SSS

....SST.
S

TT


Template Predicted Secondary structure 























....

.





Template SS confidence 















































































   5960.........70.........80.........90.........100... ......110.........120 .........130...
 
   91........100......
Predicted Secondary structure 








Query SS confidence 















Query Sequence  EWAKSRERYHRDDKRR
Query Conservation    
            
Alig confidence 















Template Conservation       
         
Template Sequence  RPREQKEFQSPASKSP
Template Known Secondary structure  B
S

S









Template Predicted Secondary structure 













Template SS confidence 















   134.....140.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions