Job Description C6Y4C0 Confidence 99.82% Date Sun Jul 8 11:45:08 BST 2012 Rank 16 Aligned Residues 97 % Identity 21% Template c2do4A_ PDB info PDB header:immune system Chain: A: PDB Molecule:squamous cell carcinoma antigen recognized by t- PDBTitle: solution structure of the rna binding domain of squamous2 cell carcinoma antigen recognized by t cells 3 Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	A	P	S	N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	G	S	S	G	V	F	R	Y	S	T	S	L	E	K	H	K	L	F	I	S	G	L	P	F	S	C	T	K	E	E	L	E	E	I	C	K	A	H	G	T	V	K	D	L	R	L	V	T	N	R	A	G	K	P	K	G	L	A	Y	V	E	Y	E	N	E	S	Q	A	S	Q	A	V	M	K	M	D	G	M
Template Known Secondary structure						S	S					S	S					S						S			T	T											T	T	T	S											T	T	S											S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	G	N	D	I	I	F	V	E	W	A	K	S	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	K	E	N	I	I	K	V	A	I	S	N	S	G	P	S
Template Known Secondary structure			S	S	S												S
Template Predicted Secondary structure
Template SS confidence
		865	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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