Job Description C6Y4C0 Confidence 99.73% Date Sun Jul 8 11:45:08 BST 2012 Rank 137 Aligned Residues 86 % Identity 21% Template c2dnpA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna-binding protein 14; PDBTitle: solution structure of rna binding domain 2 in rna-binding2 protein 14 Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K	I	G	N	D	I	I
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.
Template Sequence		G	S	S	G	S	S	G	N	T	W	K	I	F	V	G	N	V	S	A	A	C	T	S	Q	E	L	R	S	L	F	E	R	R	G	R	V	I	E	C	D	.	.	.	.	.	.	.	V	V	K	D	Y	A	F	V	H	M	E	K	E	A	D	A	K	A	A	I	A	Q	L	N	G	K	E	V	K	G	K	R	I
Template Known Secondary structure						S	S			S							S			T	T														S							.	.	.	.	.	.	.			S	S							S													T	T				T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	E	W	A	K	S	R	E	R	Y	H	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	E	L	S	T	K	G	Q	K	K	S	G
Template Known Secondary structure						S								S
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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