Job Description C6Y4C0 Confidence 99.60% Date Sun Jul 8 11:45:08 BST 2012 Rank 198 Aligned Residues 79 % Identity 14% Template c2dnlA_ PDB info PDB header:translation Chain: A: PDB Molecule:cytoplasmic polyadenylation element binding PDBTitle: solution structure of rna binding domain in cytoplasmic2 polyadenylation element binding protein 3 Resolution UNK

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.												.
Predicted Secondary structure																																												.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	.	.	.	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	.	.	.	.	.	.	.	.	.	.	.	M
Query Conservation																																												.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	S	G	S	R	K	V	F	V	G	G	L	P	P	D	I	D	E	D	E	I	T	A	S	F	R	R	F	G	P	L	V	V	D	W	P	H	K	A	E	S	K	S	Y	F	P	P	K	G	Y	A	F	L	L	F	Q	E	E	S	S	V	Q	A	L	I	D	A	C	L	E	E	D	G	K	L	Y	L	C	V
Template Known Secondary structure		S	S	S												T	T										T	T	T	T								T	T	S	S	S	S				S		T	T	S							S	S											S				T	T
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
		79	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	A	K	I	G	N	D	I	I	F	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	P	T	I	K	D	K	P	V	Q	I	R
Template Known Secondary structure				S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		502	.	.	.	.	.	.	.	510	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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