Job Description C6Y4C0 Confidence 99.79% Date Sun Jul 8 11:45:08 BST 2012 Rank 42 Aligned Residues 102 % Identity 15% Template c2dngA_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic translation initiation factor 4h; PDBTitle: solution structure of rna binding domain in eukaryotic2 translation initiation factor 4h Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	P	S	N	T	P	T	G	F	N	Y	K	P	G	H	T	L	Y	I	R	N	F	G	T	D	M	R	A	R	T	L	G	Q	A	F	E	K	W	G	R	I	V	R	C	D	I	P	I	S	S	N	P	Q	A	H	R	Y	A	F	V	E	F	E	E	R	E	K	A	E	L	A	H	E	K	M	R	N	A	K
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		G	S	S	G	S	S	G	K	E	L	P	T	E	P	P	Y	T	A	Y	V	G	N	L	P	F	N	T	V	Q	G	D	I	D	A	I	F	K	D	L	S	I	R	S	V	R	L	V	R	D	K	D	T	D	K	F	K	G	F	C	Y	V	E	F	D	E	V	D	S	L	K	E	A	L	T	.	Y	D	G	A	L
Template Known Secondary structure													S	S	S								S			T	T										T	T	T	S											S	S	S		S										S	S								G	G	.	G	T	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	N	D	I	I	F	V	E	W	A	K	S	R	E	R	Y	H	R	D	D	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	D	R	S	L	R	V	D	I	A	E	G	R	K	Q	D	K	S	G	P	S	S
Template Known Secondary structure			T	T																S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions